Appro PCC Cluster
をテンプレートにして作成
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開始行:
[[MPC Group]]/[[並列計算機]]
*Appro PC Cluster [#l882e7b6]
**Appro GreenBlade222X(64nodes) #High Speed Cluster [#nc2...
Hostname: pcc.jaist.ac.jp
-System 64nodes / 512cpu cores
--Node Spec
---Intel Xeon 2.93GHz(Nehalem-EP) * 2sockets
---Memory 24GB
-Compilar
--PGI Fortran 90/95, Fortran 77, C, C++
-Software
--Material Studio
**Appro 1143H(8nodes) #Large Memory Cluster [#m5b851b2]
Hostname: pcc-m01.jaist.ac.jp,pcc-m02.jaist.ac.jp
-System 8nodes / 192cpu cores
--Node Spec
---AMD Opteron 2.6GHz(Istanbul) * 4sockets
---Memory 128GB
-Compilar
--PGI Fortran 90/95, Fortran 77, C, C++
-Software
--Gaussian09 (only Large Memory Cluster)
--Material Studio
*Queue CLASS [#n74c4f5e]
|~Node|~CLASS|~NODE/CORE|~TIME|~EXECUTABLE JOB|~EXECUTABL...
|HS|TINY|2node|30min|1job|1job/usr|N/A|
|HS|SINGLE|1node/1-8core|7days|32jobs|16jobs/usr|1|
|HS|SMALL|1-4node/1-32core|7days|16jobs|4jobs/usr|2|
|HS|MEDIUM|4-8node/32-64core|48hour|4job|2job/usr|4|
|HS|LARGE|8-16node/64-128core|24hour|2job|1job/usr|5|
|HS|APPLI|1-4node/1-32core|3week|16job|4job/usr|3|
|LM|LM-SINGLE|1node/1-8core|48hour|4job|2job/usr|1|
|LM|LM-APP-S|1node/1-8core|1week|32job|12job/usr|2|
|LM|LM-APPLI|1node/1-8core|3week|4job|2job/usr|2|
|LM|LM-LONG-L|application|application|application|applica...
*Example of Script for PBS [#k65e81b2]
#!/bin/bash
#PBS -q QUEUE CLASS
#PBS -i oe -l select=16:ncpus=8:mpiprocs=8
cd $PBS_O_WORKDIR
NPROCS='cat $PBS_NODEFILE|wc -l'
mpirun_rsh -np ${NPROCS} -hostfile ${PBS_NODEFILE} ./a.out
select=16 :16nodes&br;
ncpus=8:mpirocs=8 :8 prallel
*Useful Command [#e23e0b4c]
|Command|Description|Option|
|qsub <PBS script>| submit a job to a PBS batch system||
|qstat | confirm the state of job| -a|
|qdel <PBS script>| abort your job||
|pbsnodes | check the state of nodes| -l -a|
*Memo [#sea0a599]
Defaults already exist; overwrite them? (y/N) と聞かれる...
--yes をつけて実行~
~
%mpi-selector --set impi --yes
http://isc-w3.jaist.ac.jp/iscenter/index.php?id=447
終了行:
[[MPC Group]]/[[並列計算機]]
*Appro PC Cluster [#l882e7b6]
**Appro GreenBlade222X(64nodes) #High Speed Cluster [#nc2...
Hostname: pcc.jaist.ac.jp
-System 64nodes / 512cpu cores
--Node Spec
---Intel Xeon 2.93GHz(Nehalem-EP) * 2sockets
---Memory 24GB
-Compilar
--PGI Fortran 90/95, Fortran 77, C, C++
-Software
--Material Studio
**Appro 1143H(8nodes) #Large Memory Cluster [#m5b851b2]
Hostname: pcc-m01.jaist.ac.jp,pcc-m02.jaist.ac.jp
-System 8nodes / 192cpu cores
--Node Spec
---AMD Opteron 2.6GHz(Istanbul) * 4sockets
---Memory 128GB
-Compilar
--PGI Fortran 90/95, Fortran 77, C, C++
-Software
--Gaussian09 (only Large Memory Cluster)
--Material Studio
*Queue CLASS [#n74c4f5e]
|~Node|~CLASS|~NODE/CORE|~TIME|~EXECUTABLE JOB|~EXECUTABL...
|HS|TINY|2node|30min|1job|1job/usr|N/A|
|HS|SINGLE|1node/1-8core|7days|32jobs|16jobs/usr|1|
|HS|SMALL|1-4node/1-32core|7days|16jobs|4jobs/usr|2|
|HS|MEDIUM|4-8node/32-64core|48hour|4job|2job/usr|4|
|HS|LARGE|8-16node/64-128core|24hour|2job|1job/usr|5|
|HS|APPLI|1-4node/1-32core|3week|16job|4job/usr|3|
|LM|LM-SINGLE|1node/1-8core|48hour|4job|2job/usr|1|
|LM|LM-APP-S|1node/1-8core|1week|32job|12job/usr|2|
|LM|LM-APPLI|1node/1-8core|3week|4job|2job/usr|2|
|LM|LM-LONG-L|application|application|application|applica...
*Example of Script for PBS [#k65e81b2]
#!/bin/bash
#PBS -q QUEUE CLASS
#PBS -i oe -l select=16:ncpus=8:mpiprocs=8
cd $PBS_O_WORKDIR
NPROCS='cat $PBS_NODEFILE|wc -l'
mpirun_rsh -np ${NPROCS} -hostfile ${PBS_NODEFILE} ./a.out
select=16 :16nodes&br;
ncpus=8:mpirocs=8 :8 prallel
*Useful Command [#e23e0b4c]
|Command|Description|Option|
|qsub <PBS script>| submit a job to a PBS batch system||
|qstat | confirm the state of job| -a|
|qdel <PBS script>| abort your job||
|pbsnodes | check the state of nodes| -l -a|
*Memo [#sea0a599]
Defaults already exist; overwrite them? (y/N) と聞かれる...
--yes をつけて実行~
~
%mpi-selector --set impi --yes
http://isc-w3.jaist.ac.jp/iscenter/index.php?id=447
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